Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma-e factor rsea | D9K54_09335 | Not Available | Negative | 1953460 - 1954110 | 24322.8 |
| ecf rna polymerase sigma-e factor | D9K54_09340 | Not Available | Negative | 1954143 - 1954718 | 21697.0 |
| rpoe leader peptide rsed | D9K54_09345 | Not Available | Negative | 1954715 - 1954870 | 6229.83 |
| l-aspartate oxidase | D9K54_09350 | Not Available | Positive | 1955126 - 1956748 | 60309.9 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | D9K54_09355 | Not Available | Negative | 1956733 - 1957470 | 27301.5 |
| atp-dependent rna helicase srmb | D9K54_09360 | Not Available | Positive | 1957602 - 1958936 | 49901.0 |
| cysteine/o-acetylserine transporter | D9K54_09370 | Not Available | Positive | 1959952 - 1960539 | 21355.6 |
| autonomous glycyl radical cofactor grca | D9K54_09375 | Not Available | Negative | 1960595 - 1960978 | 14269.0 |
| uracil-dna glycosylase | D9K54_09380 | Not Available | Positive | 1961283 - 1961972 | 25682.6 |
| trna/rrna methyltransferase | D9K54_09385 | Not Available | Negative | 1962020 - 1963057 | 37800.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





