Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulatory protein p-ii 1 | D9K54_09235 | Not Available | Negative | 1931756 - 1932094 | 12426.2 |
| response regulator | D9K54_09240 | Not Available | Negative | 1932155 - 1933489 | 49152.3 |
| two-component system qseef-associated lipoprotein qseg | D9K54_09245 | Not Available | Negative | 1933479 - 1934192 | 27292.3 |
| two-component sensor histidine kinase | D9K54_09250 | Not Available | Negative | 1934357 - 1935784 | 53310.5 |
| phosphoribosylformylglycinamidine synthase | D9K54_09255 | Not Available | Negative | 1936360 - 1940247 | 141409.0 |
| lytic transglycosylase f | D9K54_09260 | Not Available | Positive | 1940505 - 1942061 | 58304.3 |
| trna adenosine(34) deaminase tada | D9K54_09265 | Not Available | Negative | 1942058 - 1942594 | 20045.4 |
| phosphatidylglycerophosphatase c | D9K54_09270 | Not Available | Negative | 1942619 - 1943254 | 24437.8 |
| murr/rpir family transcriptional regulator | D9K54_09275 | Not Available | Positive | 1943463 - 1944311 | 30709.3 |
| 4fe-4s dicluster ferredoxin yfhl | D9K54_09280 | Not Available | Positive | 1944367 - 1944627 | 9848.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





