Escherichia coli strain L889

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain L889 is a Gram-negative, rod-shaped bacterium that typically exhibits cell arrangements in pairs or singles. This strain thrives optimally at 37.0°C, a temperature commonly found within the human body, suggesting its adaptation to a host-associated habitat. As a facultative anaerobe, E. coli strain L889 has the metabolic flexibility to grow in both aerobic and anaerobic environments, allowing it to colonize various niches within its host. The properties of this strain enable it to utilize diverse metabolic pathways, facilitating its survival under fluctuating oxygen levels. Given its association with host environments, E. coli strain L889 may play a role in the complex microbial communities found within the gastrointestinal tract, contributing to nutrient absorption and metabolism. Understanding the physiological and ecological traits of this strain can provide insights into its potential interactions within the microbiome, emphasizing the importance of E. coli not only as a model organism in microbiological research but also as a key player in host-microbe dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain L889
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain L889

Accession NumberRIZO00000000.1

Gene Summary

Adenine Count

1386626 bp

Thymine Count

1382639 bp

Guanine Count

1409391 bp

Cytosine Count

1412408 bp

Genome Length

5605530 bp

Protein-coding Genes

5216 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinD9K54_09695Not Available-2009566 - 201024626036.6
Hypothetical proteinD9K54_09700Not Available-2010243 - 201088724649.9
Hypothetical proteinD9K54_09705Not Available-2010884 - 20111238718.51
Hypothetical proteinD9K54_09710Not Available-2011116 - 20113197935.78
Putative ninc proteinD9K54_09715Not Available-2011316 - 201218833560.5
Hypothetical proteinD9K54_09720Not Available-2012198 - 201277622145.5
3'-phosphatase, 5'-polynucleotide kinaseD9K54_09725Not Available-2012971 - 201347719133.1
Putative morphogenetic proteinD9K54_09730Not Available-2013550 - 201481248322.5
Putative morphogenic function protein pmgrD9K54_09735Not Available-2014814 - 20150328319.25
HdmdD9K54_09740Not Available-2015114 - 201581526952.1

Displaying genes 11 – 20 of 5469 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites