Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | D9K54_09185 | Not Available | Positive | 1918033 - 1918455 | 15179.3 |
| aldose 1-epimerase | D9K54_09190 | Not Available | Negative | 1918503 - 1919375 | 32658.1 |
| alcohol dehydrogenase | D9K54_09195 | Not Available | Negative | 1919387 - 1920448 | 38082.1 |
| abc transporter permease | D9K54_09200 | Not Available | Negative | 1920514 - 1921512 | 34517.7 |
| sugar abc transporter atp-binding protein | D9K54_09205 | Not Available | Negative | 1921536 - 1923047 | 55011.8 |
| sugar abc transporter substrate-binding protein | D9K54_09210 | Not Available | Negative | 1923070 - 1924053 | 35057.2 |
| duf5107 domain-containing protein | D9K54_09215 | Not Available | Negative | 1924150 - 1927431 | 123971.0 |
| rok family protein | D9K54_09220 | Not Available | Positive | 1927549 - 1928742 | 44592.4 |
| serine hydroxymethyltransferase | D9K54_09225 | Not Available | Negative | 1928940 - 1930193 | 45319.2 |
| no-inducible flavohemoprotein | D9K54_09230 | Not Available | Positive | 1930521 - 1931711 | 43839.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





