Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase b | D9K54_09085 | Not Available | Negative | 1900062 - 1901345 | 46228.7 |
| fe-s assembly protein iscx | D9K54_09090 | Not Available | Negative | 1901404 - 1901604 | 7731.92 |
| isc system 2fe-2s type ferredoxin | D9K54_09095 | Not Available | Negative | 1901616 - 1901951 | 12345.5 |
| molecular chaperone hsca | D9K54_09100 | Not Available | Negative | 1901953 - 1903803 | 65656.3 |
| co-chaperone protein hscb | D9K54_09105 | Not Available | Negative | 1903820 - 1904335 | 20138.8 |
| iron-sulfur cluster assembly protein isca | D9K54_09110 | Not Available | Negative | 1904431 - 1904754 | 11556.7 |
| iron-sulfur cluster scaffold-like protein | D9K54_09115 | Not Available | Negative | 1904771 - 1905157 | 13849.3 |
| iscs subfamily cysteine desulfurase | D9K54_09120 | Not Available | Negative | 1905185 - 1906399 | 45092.2 |
| fe-s cluster assembly transcriptional regulator iscr | D9K54_09125 | Not Available | Negative | 1906511 - 1906999 | 17337.6 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | D9K54_09130 | Not Available | Negative | 1907270 - 1908010 | 27049.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





