Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imp dehydrogenase | D9K54_08985 | Not Available | Negative | 1872380 - 1873846 | 52025.6 |
| exodeoxyribonuclease vii large subunit | D9K54_08990 | Not Available | Positive | 1874008 - 1875378 | 51790.3 |
| hypothetical protein | D9K54_08995 | Not Available | Negative | 1875375 - 1875590 | 7935.65 |
| ribosome biogenesis gtpase der | D9K54_09000 | Not Available | Negative | 1875659 - 1877131 | 55039.1 |
| outer membrane protein assembly factor bamb | D9K54_09005 | Not Available | Negative | 1877249 - 1878427 | 41859.6 |
| ancillary secyeg translocon subunit | D9K54_09010 | Not Available | Negative | 1878438 - 1879058 | 22177.2 |
| histidine--trna ligase | D9K54_09015 | Not Available | Negative | 1879076 - 1880350 | 47032.2 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) | D9K54_09020 | Not Available | Negative | 1880461 - 1881579 | 40686.1 |
| cytoskeleton protein rodz | D9K54_09025 | Not Available | Negative | 1881606 - 1882619 | 36164.5 |
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | D9K54_09030 | Not Available | Negative | 1882904 - 1884058 | 43102.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





