Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 subunit h | D9K54_08885 | Not Available | Positive | 1849940 - 1850485 | 20050.3 |
| hydrogenase-4 component i | D9K54_08890 | Not Available | Positive | 1850482 - 1851240 | 28102.9 |
| hydrogenase-4 component j | D9K54_08895 | Not Available | Positive | 1851233 - 1851646 | 15621.9 |
| gaf domain-containing protein | D9K54_08900 | Not Available | Positive | 1851676 - 1853688 | 75282.7 |
| formate transporter | D9K54_08905 | Not Available | Positive | 1853710 - 1854558 | 30550.3 |
| ai-2e family transporter | D9K54_08910 | Not Available | Negative | 1854596 - 1855657 | 39196.9 |
| beta-barrel assembly-enhancing protease | D9K54_08915 | Not Available | Positive | 1855870 - 1857333 | 53911.1 |
| arsenate reductase (glutaredoxin) | D9K54_08920 | Not Available | Positive | 1857354 - 1857713 | 13417.4 |
| dnaa inactivator hda | D9K54_08925 | Not Available | Negative | 1857851 - 1858597 | 28371.4 |
| uracil/xanthine transporter | D9K54_08930 | Not Available | Negative | 1858647 - 1859936 | 45063.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





