Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | D9K54_08835 | Not Available | Negative | 1838610 - 1839488 | 31285.9 |
| glycine cleavage system transcriptional repressor | D9K54_08840 | Not Available | Positive | 1839634 - 1840206 | 20769.8 |
| thioredoxin-dependent thiol peroxidase | D9K54_08845 | Not Available | Positive | 1840206 - 1840676 | 17634.9 |
| 4fe-4s dicluster domain-containing protein | D9K54_08850 | Not Available | Positive | 1840929 - 1841546 | 22172.5 |
| hydrogenase 4 subunit b | D9K54_08855 | Not Available | Positive | 1841546 - 1843564 | 72606.4 |
| hydrogenase 3 membrane subunit | D9K54_08860 | Not Available | Positive | 1843575 - 1844522 | 34315.3 |
| hydrogenase 4 subunit d | D9K54_08865 | Not Available | Positive | 1844539 - 1845978 | 51769.7 |
| hydrogenase 4 membrane subunit | D9K54_08870 | Not Available | Positive | 1845990 - 1846640 | 23332.9 |
| hydrogenase 4 subunit f | D9K54_08875 | Not Available | Positive | 1846645 - 1848225 | 56627.5 |
| hydrogenase large subunit | D9K54_08880 | Not Available | Positive | 1848215 - 1849930 | 65147.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





