Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion protein hlyd | D9K54_00015 | Not Available | Positive | 3888 - 4883 | 36287.7 |
| abc transporter atp-binding protein | D9K54_00020 | Not Available | Positive | 4876 - 6612 | 63163.3 |
| inner membrane transport permease ybhs | D9K54_00025 | Not Available | Positive | 6605 - 7738 | 42062.4 |
| inner membrane transport permease ybhr | D9K54_00030 | Not Available | Positive | 7749 - 8855 | 41568.2 |
| hypothetical protein | D9K54_00035 | Not Available | Negative | 8817 - 9227 | 15435.6 |
| endonuclease/exonuclease/phosphatase family protein | D9K54_00040 | Not Available | Positive | 9360 - 10121 | 28791.4 |
| cardiolipin synthase clsb | D9K54_00045 | Not Available | Positive | 10118 - 11359 | 47613.2 |
| upf0104 family protein | D9K54_00050 | Not Available | Positive | 11359 - 12315 | 35906.6 |
| bax inhibitor-1/ycca family protein | D9K54_00055 | Not Available | Negative | 12351 - 13064 | 26090.9 |
| bax inhibitor-1/ycca family protein | D9K54_00060 | Not Available | Negative | 13272 - 13976 | 25873.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





