Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate/thiosulfate import atp-binding protein cysa | D9K54_08585 | Not Available | Negative | 1786718 - 1787815 | 41061.4 |
| sulfate abc transporter permease | D9K54_08590 | Not Available | Negative | 1787805 - 1788680 | 32539.6 |
| sulfate/thiosulfate abc transporter permease cyst | D9K54_08595 | Not Available | Negative | 1788680 - 1789513 | 30310.5 |
| sulfate abc transporter substrate-binding protein | D9K54_08600 | Not Available | Negative | 1789513 - 1790529 | 37630.6 |
| nad(p)-dependent oxidoreductase | D9K54_08605 | Not Available | Negative | 1790687 - 1791478 | 27833.6 |
| hth-type transcriptional regulator murr | D9K54_08610 | Not Available | Negative | 1791607 - 1792464 | 31396.9 |
| n-acetylmuramic acid 6-phosphate etherase | D9K54_08615 | Not Available | Positive | 1792628 - 1793524 | 31069.7 |
| pts n-acetylmuramic acid transporter subunits iibc | D9K54_08620 | Not Available | Positive | 1793528 - 1794952 | 49784.0 |
| penicillin binding protein pbp4b | D9K54_08625 | Not Available | Positive | 1794955 - 1796259 | 47586.9 |
| deferrochelatase/peroxidase | D9K54_08630 | Not Available | Negative | 1796317 - 1797216 | 33086.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





