Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kdo(2)-lipid iv(a) palmitoleoyltransferase | D9K54_08380 | Not Available | Positive | 1748935 - 1749855 | 35525.5 |
| membrane protein ypdk | D9K54_08385 | Not Available | Positive | 1750211 - 1750282 | 2704.57 |
| glutamate--pyruvate aminotransferase alac | D9K54_08390 | Not Available | Negative | 1750347 - 1751585 | 46218.8 |
| sensor histidine kinase | D9K54_08395 | Not Available | Positive | 1751962 - 1753659 | 62661.3 |
| dna-binding response regulator | D9K54_08400 | Not Available | Positive | 1753674 - 1754408 | 28722.6 |
| arac family transcriptional regulator | D9K54_08405 | Not Available | Positive | 1754421 - 1755278 | 32411.5 |
| phosphoenolpyruvate--protein phosphotransferase | D9K54_08410 | Not Available | Negative | 1755281 - 1757776 | 92024.1 |
| aminopeptidase ypde | D9K54_08415 | Not Available | Negative | 1757801 - 1758838 | 37411.1 |
| aminopeptidase | D9K54_08420 | Not Available | Negative | 1758838 - 1759923 | 39603.2 |
| fructose-like permease iic component | D9K54_08425 | Not Available | Negative | 1759938 - 1761185 | 43955.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





