Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail component | D9K54_25275 | Not Available | Positive | 4936341 - 4937039 | 25644.0 |
| Tail fiber component | D9K54_25280 | Not Available | Positive | 4937045 - 4937788 | 28495.5 |
| Putative tail component | D9K54_25285 | Not Available | Positive | 4937686 - 4938333 | 22548.3 |
| Putative tail tip assembly protein | D9K54_25290 | Not Available | Positive | 4938394 - 4941870 | 126639.0 |
| Putative lom-like outer membrane protein | D9K54_25295 | Not Available | Positive | 4941940 - 4942539 | 21669.0 |
| Qin prophage | D9K54_25300 | Not Available | Positive | 4942604 - 4945522 | 96461.2 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 5 - 120 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 125 - 240 | Not Available |
| atp-dependent rna helicase rhle | D9K54_00005 | Not Available | Negative | 1621 - 2985 | 50008.5 |
| transcriptional regulator | D9K54_00010 | Not Available | Positive | 3214 - 3885 | 25018.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





