Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | D9K54_08125 | Not Available | Negative | 1691617 - 1692885 | 45409.1 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | D9K54_08130 | Not Available | Negative | 1692955 - 1693869 | 33323.9 |
| deda family protein | D9K54_08135 | Not Available | Negative | 1694025 - 1694684 | 24662.8 |
| trna pseudouridine(38-40) synthase trua | D9K54_08140 | Not Available | Negative | 1694767 - 1695579 | 30414.2 |
| aspartate-semialdehyde dehydrogenase | D9K54_08145 | Not Available | Negative | 1695579 - 1696592 | 36338.1 |
| 4-phosphoerythronate dehydrogenase pdxb | D9K54_08150 | Not Available | Negative | 1696658 - 1697794 | 41349.0 |
| flagella biosynthesis regulator flk | D9K54_08155 | Not Available | Positive | 1697893 - 1698888 | 36670.5 |
| arabinose transporter | D9K54_08160 | Not Available | Negative | 1698885 - 1700063 | 40495.8 |
| 3-oxoacyl-acp synthase i | D9K54_08165 | Not Available | Negative | 1700372 - 1701592 | 42615.9 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | D9K54_08170 | Not Available | Positive | 1701751 - 1703757 | 74581.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





