Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf412 domain-containing protein | D9K54_08025 | Not Available | Negative | 1672348 - 1672803 | 17214.1 |
| acetate kinase | D9K54_08030 | Not Available | Positive | 1673141 - 1674343 | 43293.0 |
| phosphate acetyltransferase | D9K54_08035 | Not Available | Positive | 1674418 - 1676562 | 77192.6 |
| putative basic amino acid antiporter yfcc | D9K54_08040 | Not Available | Positive | 1676752 - 1678272 | 54800.0 |
| nudix hydrolase yfcd | D9K54_08045 | Not Available | Negative | 1678305 - 1678847 | 20376.9 |
| phosphodiesterase | D9K54_08050 | Not Available | Negative | 1678905 - 1679456 | 19992.1 |
| glutathione transferase | D9K54_08055 | Not Available | Negative | 1679512 - 1680156 | 24298.9 |
| gsh-dependent disulfide bond oxidoreductase | D9K54_08060 | Not Available | Positive | 1680292 - 1680939 | 24551.2 |
| dihydroneopterin triphosphate 2'-epimerase | D9K54_08065 | Not Available | Positive | 1680996 - 1681358 | 14082.8 |
| tigr01777 family protein | D9K54_08070 | Not Available | Positive | 1681379 - 1682272 | 32704.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





