Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit e | D9K54_07975 | Not Available | Negative | 1661223 - 1661723 | 18591.1 |
| nadh-quinone oxidoreductase subunit c/d | D9K54_07980 | Not Available | Negative | 1661726 - 1663528 | 68728.5 |
| nadh-quinone oxidoreductase subunit b | D9K54_07985 | Not Available | Negative | 1663622 - 1664284 | 25057.3 |
| nadh-quinone oxidoreductase subunit nuoa | D9K54_07990 | Not Available | Negative | 1664300 - 1664743 | 16458.2 |
| transcriptional regulator | D9K54_07995 | Not Available | Negative | 1665374 - 1666312 | 34563.7 |
| glutamate--pyruvate aminotransferase alaa | D9K54_08000 | Not Available | Positive | 1667232 - 1668449 | 45519.9 |
| 5'-deoxynucleotidase | D9K54_08005 | Not Available | Positive | 1668533 - 1669132 | 22667.2 |
| slc13 family permease | D9K54_08010 | Not Available | Negative | 1669191 - 1671023 | 65890.0 |
| sugar phosphatase | D9K54_08015 | Not Available | Negative | 1671110 - 1671760 | 23026.8 |
| yfbu family protein | D9K54_08020 | Not Available | Negative | 1671771 - 1672265 | 19537.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





