Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | D9K54_07820 | Not Available | Negative | 1627223 - 1627825 | 22290.8 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | D9K54_07825 | Not Available | Positive | 1628133 - 1629272 | 41643.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | D9K54_07830 | Not Available | Positive | 1629276 - 1630244 | 36341.3 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | D9K54_07835 | Not Available | Positive | 1630244 - 1632226 | 74228.0 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase arnd | D9K54_07840 | Not Available | Positive | 1632223 - 1633113 | 33113.6 |
| 4-amino-4-deoxy-l-arabinose lipid a transferase | D9K54_07845 | Not Available | Positive | 1633113 - 1634765 | 62546.9 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arne | D9K54_07850 | Not Available | Positive | 1634762 - 1635097 | 12192.7 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | D9K54_07855 | Not Available | Positive | 1635097 - 1635483 | 14144.2 |
| signal transduction protein pmrd | D9K54_07860 | Not Available | Negative | 1635477 - 1635743 | 9970.17 |
| o-succinylbenzoate--coa ligase | D9K54_07865 | Not Available | Negative | 1635853 - 1637208 | 50201.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





