Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoid-associated protein yejk | D9K54_07520 | Not Available | Negative | 1550293 - 1551300 | 37825.6 |
| duf1414 domain-containing protein | D9K54_07525 | Not Available | Positive | 1551482 - 1551709 | 8288.95 |
| duf3413 domain-containing protein | D9K54_07530 | Not Available | Positive | 1551729 - 1553489 | 67269.8 |
| Trna-pro | Not Available | Not Available | Positive | 1553564 - 1553640 | Not Available |
| autotransporter outer membrane beta-barrel domain-containing protein | D9K54_07540 | Not Available | Negative | 1553741 - 1556332 | 91278.3 |
| nitrate/nitrite response regulator protein narp | D9K54_07545 | Not Available | Positive | 1556652 - 1557299 | 23617.5 |
| cytochrome c biogenesis protein ccmh | D9K54_07550 | Not Available | Negative | 1557510 - 1558562 | 39107.3 |
| thiol:disulfide interchange protein dsbe | D9K54_07555 | Not Available | Negative | 1558559 - 1559116 | 20810.1 |
| heme lyase ccmf/nrfe family subunit | D9K54_07560 | Not Available | Negative | 1559113 - 1561056 | 71407.6 |
| cytochrome c maturation protein ccme | D9K54_07565 | Not Available | Negative | 1561053 - 1561532 | 17727.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





