Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic di-gmp phosphodiesterase | D9K54_07470 | Not Available | Positive | 1538078 - 1539634 | 58545.4 |
| abc transporter substrate-binding protein | D9K54_07475 | Not Available | Positive | 1539716 - 1541530 | 69815.7 |
| abc transporter permease | D9K54_07480 | Not Available | Positive | 1541531 - 1542625 | 40362.6 |
| abc transporter permease | D9K54_07485 | Not Available | Positive | 1542625 - 1543650 | 38095.6 |
| abc transporter atp-binding protein | D9K54_07490 | Not Available | Positive | 1543652 - 1545241 | 58743.8 |
| hypothetical protein | D9K54_07495 | Not Available | Negative | 1545245 - 1545589 | 12525.9 |
| bcr/cfla family drug resistance efflux transporter | D9K54_07500 | Not Available | Negative | 1545922 - 1547112 | 43355.4 |
| 16s rrna pseudouridine(516) synthase rsua | D9K54_07505 | Not Available | Negative | 1547140 - 1547835 | 25866.8 |
| dead/deah box helicase | D9K54_07510 | Not Available | Positive | 1547985 - 1549745 | 66460.9 |
| 50s ribosomal protein l25 | D9K54_07515 | Not Available | Positive | 1549870 - 1550154 | 10694.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





