Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | D9K54_07265 | Not Available | Negative | 1494070 - 1494831 | 26987.5 |
| multidrug resistance outer membrane protein mdtq | D9K54_07270 | Not Available | Negative | 1494884 - 1496410 | 55661.3 |
| protein yohp | D9K54_07275 | Not Available | Positive | 1496544 - 1496627 | 3092.28 |
| trna dihydrouridine(16) synthase dusc | D9K54_07280 | Not Available | Negative | 1497015 - 1497965 | 35397.8 |
| hypothetical protein | D9K54_07285 | Not Available | Positive | 1498204 - 1498602 | 14593.6 |
| cidb/lrgb family autolysis modulator | D9K54_07290 | Not Available | Positive | 1498599 - 1499294 | 24471.1 |
| cytidine deaminase | D9K54_07295 | Not Available | Positive | 1499424 - 1500308 | 31541.6 |
| protein sana | D9K54_07300 | Not Available | Positive | 1500458 - 1501177 | 27288.5 |
| duf2542 family protein | D9K54_07305 | Not Available | Positive | 1501180 - 1501419 | 9264.61 |
| nad(p)-dependent oxidoreductase | D9K54_07310 | Not Available | Positive | 1501613 - 1502851 | 44338.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





