Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yoho | D9K54_07215 | Not Available | Positive | 1483176 - 1483283 | 3642.85 |
| abc transporter permease | D9K54_07220 | Not Available | Negative | 1483264 - 1483995 | 25557.2 |
| abc transporter atp-binding protein | D9K54_07225 | Not Available | Negative | 1484000 - 1484926 | 34438.7 |
| abc transporter permease | D9K54_07230 | Not Available | Negative | 1484919 - 1486076 | 41224.3 |
| abc transporter substrate-binding protein | D9K54_07235 | Not Available | Negative | 1486083 - 1487000 | 32662.0 |
| beta-glucosidase bglx | D9K54_07240 | Not Available | Negative | 1487252 - 1489549 | 83476.8 |
| d-lactate dehydrogenase | D9K54_07245 | Not Available | Positive | 1489745 - 1491460 | 64680.0 |
| d-alanyl-d-alanine endopeptidase | D9K54_07250 | Not Available | Negative | 1491499 - 1492431 | 33889.4 |
| yip1 family protein | D9K54_07255 | Not Available | Negative | 1492605 - 1493192 | 21692.0 |
| deda family protein | D9K54_07260 | Not Available | Positive | 1493362 - 1493940 | 21422.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





