Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| terc family protein | D9K54_06905 | Not Available | Positive | 1407395 - 1408978 | 59402.8 |
| outer membrane assembly protein asma | D9K54_06910 | Not Available | Negative | 1409252 - 1411105 | 68966.9 |
| dctp deaminase | D9K54_06915 | Not Available | Negative | 1411127 - 1411708 | 21222.4 |
| uridine kinase | D9K54_06920 | Not Available | Negative | 1411800 - 1412441 | 24354.6 |
| diguanylate cyclase | D9K54_06925 | Not Available | Positive | 1412759 - 1416076 | 123899.0 |
| dna-3-methyladenine glycosylase 2 | D9K54_06930 | Not Available | Negative | 1416177 - 1417025 | 31221.8 |
| molecular chaperone | D9K54_06935 | Not Available | Positive | 1417159 - 1418511 | 49338.1 |
| helix-hairpin-helix domain-containing protein | D9K54_06940 | Not Available | Negative | 1418524 - 1420464 | 71184.2 |
| protein phosphatase 2c domain-containing protein | D9K54_06945 | Not Available | Negative | 1420461 - 1421222 | 27355.9 |
| vwa domain-containing protein | D9K54_06950 | Not Available | Negative | 1421219 - 1421878 | 24152.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





