Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | D9K54_06750 | Not Available | Negative | 1376085 - 1376498 | 15001.2 |
| yeee/yede family protein | D9K54_06755 | Not Available | Positive | 1376685 - 1377890 | 44461.5 |
| sira-like protein | D9K54_06760 | Not Available | Positive | 1377887 - 1378120 | 8653.53 |
| sos response-associated peptidase | D9K54_06765 | Not Available | Positive | 1378229 - 1378900 | 25128.7 |
| transposase | D9K54_06770 | Not Available | Negative | 1378885 - 1379151 | 9636.46 |
| is1 family transposase | D9K54_06775 | Not Available | Negative | 1379152 - 1379229 | 2485.91 |
| o23 family o-antigen flippase | D9K54_06785 | Not Available | Negative | 1379627 - 1380832 | 46091.7 |
| glycosyltransferase family 2 protein | D9K54_06790 | Not Available | Negative | 1380805 - 1381674 | 33537.4 |
| o23 family o-antigen polymerase | D9K54_06795 | Not Available | Negative | 1381671 - 1382696 | 40164.0 |
| galu regulator galf | D9K54_06800 | Not Available | Negative | 1383134 - 1384027 | 32859.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





