Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Crossover junction endodeoxyribonuclease rusa | D9K54_19875 | Not Available | Negative | 3943923 - 3944282 | 13707.8 |
| Hypothetical protein | D9K54_19880 | Not Available | Negative | 3944295 - 3945344 | 39384.4 |
| Hypothetical protein | D9K54_19885 | Not Available | Negative | 3945346 - 3945624 | 11403.3 |
| hypothetical protein | D9K54_19890 | Not Available | Negative | 3945921 - 3946313 | 14486.5 |
| Host cell-killing modulation protein | D9K54_19895 | Not Available | Negative | 3946457 - 3946669 | 7811.79 |
| Hypothetical protein | D9K54_19900 | Not Available | Positive | 3946714 - 3946821 | 4006.96 |
| hypothetical protein | D9K54_19905 | Not Available | Negative | 3946828 - 3947043 | 7584.07 |
| Putative metal-binding domain-containing protein | D9K54_19910 | Not Available | Positive | 3947237 - 3948046 | 30617.9 |
| Lygf | D9K54_19915 | Not Available | Negative | 3948193 - 3948615 | 16368.8 |
| Primosomal protein i | D9K54_19920 | Not Available | Negative | 3948656 - 3949726 | 39681.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





