Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf72 domain-containing protein | D9K54_06450 | Not Available | Positive | 1321152 - 1321499 | 13160.9 |
| hypothetical protein | D9K54_06455 | Not Available | Positive | 1321552 - 1321947 | 15209.2 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | D9K54_06460 | Not Available | Positive | 1321988 - 1322731 | 27792.3 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | D9K54_06465 | Not Available | Positive | 1322728 - 1323699 | 37128.8 |
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | D9K54_06470 | Not Available | Negative | 1323864 - 1326293 | 88882.8 |
| cytochrome c | D9K54_06475 | Not Available | Negative | 1326318 - 1327418 | 40191.5 |
| copper homeostasis protein cutc | D9K54_06480 | Not Available | Negative | 1327806 - 1328552 | 26779.4 |
| voc family protein | D9K54_06485 | Not Available | Negative | 1328566 - 1329132 | 21222.2 |
| arginine--trna ligase | D9K54_06490 | Not Available | Positive | 1329348 - 1331081 | 64685.7 |
| lysozyme inhibitor lpri family protein | D9K54_06495 | Not Available | Positive | 1331258 - 1331746 | 18881.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





