Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9K54_06350 | Not Available | Negative | 1304500 - 1304565 | 2699.43 |
| yebb family permuted papain-like enzyme | D9K54_06355 | Not Available | Positive | 1304636 - 1305238 | 22676.2 |
| crossover junction endodeoxyribonuclease ruvc | D9K54_06360 | Not Available | Negative | 1305240 - 1305761 | 18747.9 |
| yebc/pmpr family dna-binding transcriptional regulator | D9K54_06365 | Not Available | Negative | 1305796 - 1306536 | 26438.1 |
| dihydroneopterin triphosphate diphosphatase | D9K54_06370 | Not Available | Negative | 1306565 - 1307017 | 17222.5 |
| aspartate--trna ligase | D9K54_06375 | Not Available | Negative | 1307010 - 1308782 | 65873.2 |
| hydrolase | D9K54_06380 | Not Available | Positive | 1309092 - 1309658 | 20450.3 |
| duf72 domain-containing protein | D9K54_06385 | Not Available | Positive | 1309655 - 1310149 | 19263.2 |
| recombinase family protein | D9K54_06390 | Not Available | Positive | 1310202 - 1311725 | 57241.9 |
| hypothetical protein | D9K54_06395 | Not Available | Negative | 1311722 - 1312510 | 28730.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





