Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate dehydrogenase | D9K54_06300 | Not Available | Negative | 1293224 - 1294699 | 55734.5 |
| murr/rpir family transcriptional regulator | D9K54_06305 | Not Available | Positive | 1295037 - 1295906 | 31977.4 |
| pyruvate kinase ii | D9K54_06310 | Not Available | Positive | 1296034 - 1297476 | 51360.3 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | D9K54_06315 | Not Available | Negative | 1297607 - 1298578 | 37412.5 |
| murein dd-endopeptidase mepm | D9K54_06320 | Not Available | Negative | 1298698 - 1300020 | 49059.7 |
| zinc abc transporter substrate-binding protein znua | D9K54_06325 | Not Available | Negative | 1300036 - 1300968 | 33837.2 |
| mn2+/zn2+abc transporter atp-binding protein | D9K54_06330 | Not Available | Positive | 1301047 - 1301802 | 27869.3 |
| zinc abc transporter permease subunit znub | D9K54_06335 | Not Available | Positive | 1301799 - 1302584 | 27762.5 |
| holliday junction branch migration dna helicase ruvb | D9K54_06340 | Not Available | Negative | 1302731 - 1303741 | 37176.0 |
| holliday junction branch migration protein ruva | D9K54_06345 | Not Available | Negative | 1303750 - 1304361 | 22087.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





