Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Rz1 protein | D9K54_19825 | Not Available | Negative | 3940918 - 3941100 | 6487.22 |
| Endolysin | D9K54_19830 | Not Available | Negative | 3941317 - 3941850 | 19397.3 |
| Hypothetical protein | D9K54_19835 | Not Available | Negative | 3941906 - 3942220 | 11661.8 |
| Putative holin | D9K54_19840 | Not Available | Negative | 3942225 - 3942440 | 7865.48 |
| Trna,type:gly,anti_codon:tcc; | Not Available | Not Available | Positive | 3942733 - 3942807 | Not Available |
| Trna,type:thr,anti_codon:tgt; | Not Available | Not Available | Positive | 3942811 - 3942886 | Not Available |
| Trna,type:lys,anti_codon:ttt; | Not Available | Not Available | Positive | 3942889 - 3942965 | Not Available |
| Trna,type:met,anti_codon:cat; | Not Available | Not Available | Positive | 3942967 - 3943042 | Not Available |
| hypothetical | D9K54_19865 | Not Available | Negative | 3943085 - 3943206 | 4657.87 |
| Bacteriophage antiterminator protein q | D9K54_19870 | Not Available | Negative | 3943237 - 3943926 | 26427.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





