Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethyl sulfoxide reductase subunit a | D9K54_05890 | Not Available | Negative | 1213007 - 1215433 | 89631.7 |
| duf1161 domain-containing protein | D9K54_05895 | Not Available | Negative | 1215632 - 1215937 | 10491.3 |
| ynfc family lipoprotein | D9K54_05900 | Not Available | Positive | 1216045 - 1216755 | 26508.3 |
| spermidine n1-acetyltransferase | D9K54_05905 | Not Available | Negative | 1216758 - 1217318 | 21888.2 |
| duf1283 family protein | D9K54_05910 | Not Available | Negative | 1217353 - 1217694 | 12943.4 |
| ynfa family protein | D9K54_05915 | Not Available | Positive | 1217829 - 1218155 | 11920.2 |
| d-galactonate dehydratase family protein | D9K54_05920 | Not Available | Positive | 1218361 - 1219575 | 45971.0 |
| starvation-sensing protein rspb | D9K54_05925 | Not Available | Positive | 1219587 - 1220606 | 36552.1 |
| mfs transporter | D9K54_05930 | Not Available | Positive | 1220664 - 1222031 | 49370.7 |
| mannitol dehydrogenase family protein | D9K54_05935 | Not Available | Positive | 1222120 - 1223580 | 53594.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





