Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucuronide uptake porin uidc | D9K54_05740 | Not Available | Positive | 1180831 - 1182096 | 46620.2 |
| duf945 domain-containing protein | D9K54_05745 | Not Available | Negative | 1182141 - 1183649 | 54710.2 |
| mannose-6-phosphate isomerase | D9K54_05750 | Not Available | Negative | 1183750 - 1184925 | 42812.3 |
| fumarate hydratase | D9K54_05755 | Not Available | Positive | 1185124 - 1186770 | 60348.1 |
| class ii fumarate hydratase | D9K54_05760 | Not Available | Positive | 1186913 - 1188316 | 50492.9 |
| dna replication terminus site-binding protein | D9K54_05765 | Not Available | Negative | 1188313 - 1189242 | 35773.1 |
| two-component system sensor histidine kinase rstb | D9K54_05770 | Not Available | Negative | 1189318 - 1190619 | 49278.7 |
| two-component system response regulator rsta | D9K54_05775 | Not Available | Negative | 1190623 - 1191342 | 26678.3 |
| glpm family protein | D9K54_05780 | Not Available | Positive | 1191471 - 1191806 | 12323.8 |
| dihydromonapterin reductase | D9K54_05785 | Not Available | Negative | 1191803 - 1192525 | 26349.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





