Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | D9K54_05590 | Not Available | Negative | 1151457 - 1152314 | 31587.7 |
| duf1656 domain-containing protein | D9K54_05595 | Not Available | Negative | 1152317 - 1152553 | 8891.33 |
| slya family transcriptional regulator | D9K54_05600 | Not Available | Positive | 1152754 - 1153188 | 16354.0 |
| outer membrane lipoprotein slyb | D9K54_05605 | Not Available | Negative | 1153235 - 1153702 | 15602.7 |
| anhydro-n-acetylmuramic acid kinase | D9K54_05610 | Not Available | Positive | 1153976 - 1155085 | 39526.7 |
| c-type lysozyme inhibitor | D9K54_05615 | Not Available | Positive | 1155183 - 1155512 | 12590.3 |
| pyridoxine/pyridoxamine 5'-phosphate oxidase | D9K54_05620 | Not Available | Positive | 1155571 - 1156227 | 25546.6 |
| tyrosine--trna ligase | D9K54_05625 | Not Available | Positive | 1156356 - 1157630 | 47529.6 |
| pyridoxal kinase pdxy | D9K54_05630 | Not Available | Positive | 1157692 - 1158552 | 31192.8 |
| glutathione transferase gsta | D9K54_05635 | Not Available | Negative | 1158596 - 1159201 | 22869.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





