Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| grx4 family monothiol glutaredoxin | D9K54_05540 | Not Available | Positive | 1139476 - 1139823 | 12879.5 |
| atp-dependent helicase | D9K54_05545 | Not Available | Negative | 1139874 - 1144490 | 169266.0 |
| ribonuclease t | D9K54_05550 | Not Available | Negative | 1144583 - 1145230 | 23534.0 |
| lactoylglutathione lyase | D9K54_05555 | Not Available | Negative | 1145333 - 1145740 | 14920.7 |
| alkene reductase | D9K54_05560 | Not Available | Negative | 1145821 - 1146918 | 39519.6 |
| tetr/acrr family transcriptional regulator | D9K54_05565 | Not Available | Negative | 1146956 - 1147555 | 22211.6 |
| duf1289 domain-containing protein | D9K54_05570 | Not Available | Positive | 1147658 - 1147897 | 9359.15 |
| oxidoreductase | D9K54_05575 | Not Available | Positive | 1147946 - 1148842 | 33677.6 |
| superoxide dismutase | D9K54_05580 | Not Available | Positive | 1148923 - 1149444 | 17682.0 |
| fusc family protein | D9K54_05585 | Not Available | Negative | 1149445 - 1151457 | 75271.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





