Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug resistance protein mdtk | D9K54_05490 | Not Available | Negative | 1128750 - 1130123 | 49468.2 |
| riboflavin synthase | D9K54_05495 | Not Available | Positive | 1130338 - 1130979 | 23446.3 |
| cyclopropane-fatty-acyl-phospholipid synthase | D9K54_05500 | Not Available | Negative | 1131019 - 1132167 | 43911.3 |
| bcr/cfla family multidrug efflux mfs transporter | D9K54_05505 | Not Available | Negative | 1132458 - 1133669 | 43430.0 |
| lysr family transcriptional regulator | D9K54_05510 | Not Available | Positive | 1133782 - 1134714 | 35265.9 |
| purr family transcriptional regulator | D9K54_05515 | Not Available | Negative | 1134711 - 1135736 | 38177.0 |
| ynhf family membrane protein | D9K54_05520 | Not Available | Positive | 1136035 - 1136124 | 2997.87 |
| mfs transporter | D9K54_05525 | Not Available | Positive | 1136290 - 1137459 | 40013.6 |
| superoxide dismutase | D9K54_05530 | Not Available | Negative | 1137605 - 1138186 | 21266.8 |
| endopeptidase | D9K54_05535 | Not Available | Negative | 1138314 - 1139141 | 30332.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





