Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Terminase b protein pacb | D9K54_10195 | Not Available | Negative | 2091897 - 2093381 | 55622.7 |
| Paca | D9K54_10200 | Not Available | Negative | 2093381 - 2094574 | 45251.3 |
| Late promoter-activating protein lpa | D9K54_10205 | Not Available | Negative | 2094660 - 2095112 | 18118.8 |
| Conserved protein of unknown function pdcb | D9K54_10210 | Not Available | Negative | 2095201 - 2096244 | 39714.7 |
| Pdca | D9K54_10215 | Not Available | Negative | 2096272 - 2096451 | 6775.69 |
| Toxin doc | D9K54_10220 | Not Available | Negative | 2096456 - 2096836 | 13586.1 |
| Prevention of host death by doc toxicity | D9K54_10225 | Not Available | Negative | 2096836 - 2097057 | 8163.56 |
| hypothetical protein | D9K54_10230 | Not Available | Negative | 2097202 - 2097666 | 17176.3 |
| Putative morphogenetic protein | D9K54_10235 | Not Available | Negative | 2097751 - 2098209 | 16973.4 |
| Insertion element is2 transposase insd | D9K54_19775 | Not Available | Positive | 3934171 - 3934293 | 4775.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





