Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1496 domain-containing protein | D9K54_04975 | Not Available | Positive | 1027525 - 1027797 | 9947.98 |
| pyrimidine (deoxy)nucleoside triphosphate diphosphatase | D9K54_04980 | Not Available | Negative | 1027763 - 1028170 | 14992.9 |
| cdp-alcohol phosphatidyltransferase family protein | D9K54_04985 | Not Available | Positive | 1028257 - 1028877 | 22715.1 |
| sulfurtransferase | D9K54_04990 | Not Available | Negative | 1028886 - 1030193 | 48132.9 |
| atp-binding cassette domain-containing protein | D9K54_04995 | Not Available | Negative | 1030260 - 1030913 | 23950.0 |
| abc transporter permease subunit | D9K54_05000 | Not Available | Negative | 1030913 - 1032448 | 56255.2 |
| abc transporter substrate-binding protein | D9K54_05005 | Not Available | Negative | 1032421 - 1033587 | 42927.7 |
| carboxymuconolactone decarboxylase family protein | D9K54_05010 | Not Available | Negative | 1033597 - 1034145 | 20568.1 |
| tvp38/tmem64 family protein | D9K54_05015 | Not Available | Negative | 1034145 - 1034852 | 26140.8 |
| protein ydjy | D9K54_05020 | Not Available | Negative | 1034867 - 1035544 | 24216.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





