Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protoporphyrinogen oxidase | D9K54_04620 | Not Available | Positive | 957307 - 957852 | 21257.5 |
| ecsc family protein | D9K54_04630 | Not Available | Positive | 958652 - 959491 | 30661.7 |
| rop family plasmid primer rna-binding protein | D9K54_04635 | Not Available | Positive | 960602 - 960796 | 7282.59 |
| is1 family transposase | D9K54_04640 | Not Available | Positive | 961449 - 961565 | 4500.51 |
| duf2627 domain-containing protein | D9K54_04645 | Not Available | Positive | 961852 - 961995 | 5212.44 |
| cold-shock protein cspc | D9K54_04650 | Not Available | Positive | 962008 - 962217 | 7402.76 |
| 23s rrna (guanine(745)-n(1))-methyltransferase | D9K54_04655 | Not Available | Positive | 962383 - 963192 | 30459.6 |
| manganese efflux pump mntp | D9K54_04660 | Not Available | Negative | 963189 - 963755 | 20118.3 |
| duf986 domain-containing protein | D9K54_04665 | Not Available | Negative | 964194 - 964643 | 17328.1 |
| pts mannose transporter subunit iid | D9K54_04670 | Not Available | Negative | 964698 - 965549 | 30957.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





