Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-independent protein translocase subunit tatc | D9K54_04570 | Not Available | Positive | 945624 - 946400 | 28877.9 |
| 3'-5' ssdna/rna exonuclease tatd | D9K54_04575 | Not Available | Positive | 946442 - 947224 | 29047.6 |
| transcription/translation regulatory transformer protein rfah | D9K54_04580 | Not Available | Negative | 947221 - 947709 | 18341.3 |
| 3-octaprenyl-4-hydroxybenzoate decarboxylase | D9K54_04585 | Not Available | Positive | 947876 - 949369 | 55606.8 |
| nad(p)h-flavin reductase | D9K54_04590 | Not Available | Positive | 949415 - 950116 | 26243.5 |
| acetyl-coa c-acyltransferase fada | D9K54_04595 | Not Available | Negative | 950308 - 951471 | 40866.7 |
| fatty acid oxidation complex subunit alpha fadb | D9K54_04600 | Not Available | Negative | 951481 - 953670 | 79612.5 |
| xaa-pro dipeptidase | D9K54_04605 | Not Available | Positive | 953860 - 955191 | 50088.8 |
| impact family member yigz | D9K54_04610 | Not Available | Positive | 955191 - 955805 | 21758.1 |
| trk system potassium uptake protein trkh | D9K54_04615 | Not Available | Positive | 955844 - 957295 | 52962.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





