Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | D9K54_04520 | Not Available | Negative | 934871 - 935824 | 35631.0 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | D9K54_04525 | Not Available | Positive | 935942 - 938203 | 84682.1 |
| dienelactone hydrolase family protein | D9K54_04530 | Not Available | Negative | 938242 - 939057 | 29469.8 |
| uridine phosphorylase | D9K54_04535 | Not Available | Positive | 939319 - 940080 | 27160.7 |
| dna recombination protein rmuc | D9K54_04540 | Not Available | Positive | 940221 - 941648 | 54767.6 |
| ubiquinone/menaquinone biosynthesis c-methyltransferase ubie | D9K54_04545 | Not Available | Positive | 941743 - 942498 | 28074.8 |
| ubiquinone biosynthesis protein ubij | D9K54_04550 | Not Available | Positive | 942512 - 943117 | 22157.8 |
| ubiquinone biosynthesis protein ubib | D9K54_04555 | Not Available | Positive | 943114 - 944754 | 63206.4 |
| twin-arginine translocase subunit tata | D9K54_04560 | Not Available | Positive | 944833 - 945102 | 9663.52 |
| sec-independent protein translocase subunit tatb | D9K54_04565 | Not Available | Positive | 945106 - 945621 | 18421.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





