Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketol-acid reductoisomerase | D9K54_04220 | Not Available | Positive | 875736 - 877211 | 54130.2 |
| peptidyl-prolyl cis-trans isomerase | D9K54_04225 | Not Available | Negative | 877257 - 877538 | 10232.6 |
| hypothetical protein | D9K54_04230 | Not Available | Negative | 877737 - 878186 | 16869.4 |
| atp-dependent dna helicase rep | D9K54_04235 | Not Available | Positive | 878403 - 880424 | 77100.7 |
| guanosine-5'-triphosphate,3'-diphosphate diphosphatase | D9K54_04240 | Not Available | Negative | 880471 - 881955 | 54890.4 |
| atp-dependent rna helicase rhlb | D9K54_04245 | Not Available | Negative | 882089 - 883354 | 47128.7 |
| thiol reductase thioredoxin | D9K54_04250 | Not Available | Positive | 883485 - 883814 | 11807.2 |
| rho operon leader peptide rhol | D9K54_04255 | Not Available | Positive | 883955 - 884056 | 3750.4 |
| transcription termination factor rho | D9K54_04260 | Not Available | Positive | 884141 - 885400 | 47007.1 |
| hypothetical protein | D9K54_04265 | Not Available | Positive | 885410 - 885628 | 8290.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





