Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf413 domain-containing protein | D9K54_04170 | Not Available | Positive | 865851 - 866189 | 13134.2 |
| atp-dependent protease | D9K54_04175 | Not Available | Negative | 866214 - 867734 | 55135.6 |
| ilvgmeda operon leader peptide | D9K54_04180 | Not Available | Positive | 868086 - 868184 | 3231.32 |
| hypothetical protein | D9K54_04185 | Not Available | Positive | 868271 - 868321 | 1910.25 |
| acetolactate synthase 2 catalytic subunit | D9K54_04190 | Not Available | Positive | 868324 - 869970 | 59182.2 |
| acetolactate synthase isozyme 2 small subunit | D9K54_04195 | Not Available | Positive | 869967 - 870230 | 9703.74 |
| branched chain amino acid aminotransferase | D9K54_04200 | Not Available | Positive | 870250 - 871179 | 34095.6 |
| dihydroxy-acid dehydratase | D9K54_04205 | Not Available | Positive | 871244 - 873094 | 65535.4 |
| threonine ammonia-lyase, biosynthetic | D9K54_04210 | Not Available | Positive | 873097 - 874641 | 56187.4 |
| lysr family transcriptional regulator | D9K54_04215 | Not Available | Negative | 874693 - 875586 | 33220.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





