Achromobacter denitrificans strain AD_173

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Achromobacter

Description

Achromobacter denitrificans strain AD_173 is a notable bacterium isolated from residential soil samples, indicating its ecological niche within terrestrial environments. This strain thrives in aerobic conditions, reflecting its requirement for oxygen for growth and metabolic processes. A key characteristic of strain AD_173 is its motility, facilitated by the presence of flagella, which enhances its ability to navigate through soil environments. The bacterium is characterized by a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in its habitat. The sequence data for Achromobacter denitrificans strain AD_173 is available under the accession number RHXL00000000.1, providing a resource for further studies on its genetic makeup and potential applications. Biologically, the presence of Achromobacter denitrificans in soil suggests its role in soil health and nutrient cycling, particularly in the context of denitrification processes. This strain may contribute to the reduction of nitrates in the soil, which has implications for soil fertility and the mitigation of nitrogen pollution. Understanding the functional capabilities of such microorganisms can enhance our knowledge of soil ecosystems and their management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusAchromobacter
SpeciesAchromobacter denitrificans
Strainstrain AD_173

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatresidential soil samples; soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Achromobacter denitrificans strain AD_173

Gene Summary

Adenine Count

1162702 bp

Thymine Count

1152887 bp

Guanine Count

2383721 bp

Cytosine Count

2389944 bp

Genome Length

7090436 bp

Protein-coding Genes

6463 genes

Non-Coding Genes

184 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii toxin-antitoxin system vapc family toxinEGU64_13370Not AvailableNegative2844910 - 284533515387.5
type ii toxin-antitoxin system phd/yefm family antitoxinEGU64_13375Not AvailableNegative2845335 - 28455899343.23
bifunctional riboflavin kinase/fad synthetaseEGU64_13380Not AvailableNegative2845693 - 284665835743.2
phosphoribosylglycinamide formyltransferaseEGU64_13385Not AvailablePositive2846784 - 284744923792.4
rsmb/nop family class i sam-dependent rna methyltransferaseEGU64_13390Not AvailablePositive2848354 - 284970048571.7
acyl-coa desaturaseEGU64_13400Not AvailablePositive2850467 - 285167546035.4
dna helicase iiEGU64_13405Not AvailablePositive2851672 - 285396684521.0
chorismate mutaseEGU64_13410Not AvailablePositive2853972 - 285427711446.7
atp-binding cassette domain-containing proteinEGU64_13415Not AvailableNegative2854333 - 285626770848.4
50s ribosomal protein l3 n(5)-glutamine methyltransferaseEGU64_13420Not AvailableNegative2856264 - 285716033270.6

Displaying genes 2731 – 2740 of 6647 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.