Achromobacter denitrificans strain AD_173

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Achromobacter

Description

Achromobacter denitrificans strain AD_173 is a notable bacterium isolated from residential soil samples, indicating its ecological niche within terrestrial environments. This strain thrives in aerobic conditions, reflecting its requirement for oxygen for growth and metabolic processes. A key characteristic of strain AD_173 is its motility, facilitated by the presence of flagella, which enhances its ability to navigate through soil environments. The bacterium is characterized by a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in its habitat. The sequence data for Achromobacter denitrificans strain AD_173 is available under the accession number RHXL00000000.1, providing a resource for further studies on its genetic makeup and potential applications. Biologically, the presence of Achromobacter denitrificans in soil suggests its role in soil health and nutrient cycling, particularly in the context of denitrification processes. This strain may contribute to the reduction of nitrates in the soil, which has implications for soil fertility and the mitigation of nitrogen pollution. Understanding the functional capabilities of such microorganisms can enhance our knowledge of soil ecosystems and their management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusAchromobacter
SpeciesAchromobacter denitrificans
Strainstrain AD_173

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatresidential soil samples; soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Achromobacter denitrificans strain AD_173

Gene Summary

Adenine Count

1162702 bp

Thymine Count

1152887 bp

Guanine Count

2383721 bp

Cytosine Count

2389944 bp

Genome Length

7090436 bp

Protein-coding Genes

6463 genes

Non-Coding Genes

184 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dha2 family efflux mfs transporter permease subunitEGU64_05965Not AvailablePositive1283496 - 128503154613.4
hypothetical proteinEGU64_05970Not AvailableNegative1285081 - 128604035854.3
tartrate dehydrogenaseEGU64_05975Not AvailableNegative1286076 - 128714339077.5
duf853 domain-containing proteinEGU64_05980Not AvailableNegative1287316 - 128883053524.9
yebc/pmpr family dna-binding transcriptional regulatorEGU64_05985Not AvailablePositive1288992 - 128972326139.6
phosphoribosylamine--glycine ligaseEGU64_05990Not AvailablePositive1289747 - 129105446788.9
oxygen-dependent coproporphyrinogen oxidaseEGU64_05995Not AvailablePositive1291067 - 129197834148.1
nicotinate (nicotinamide) nucleotide adenylyltransferaseEGU64_06000Not AvailablePositive1291975 - 129256221199.5
ribosome silencing factorEGU64_06005Not AvailablePositive1292637 - 129304114814.5
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhEGU64_06010Not AvailablePositive1293049 - 129351917130.9

Displaying genes 1301 – 1310 of 6647 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.