Providencia rettgeri strain PR_162 16

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Providencia

Description

Providencia rettgeri strain PR_162 16 is a Gram-negative, rod-shaped bacterium classified as a chemoheterotroph, which indicates that it derives its energy and carbon from organic compounds. This organism is characterized as a facultative anaerobe, meaning it can grow in both the presence and absence of oxygen, and it possesses mobility due to the presence of flagella. The optimal growth temperature for P. rettgeri strain PR_162 16 is 37°C, which falls within the mesophilic range. This temperature preference aligns with its known hosts, which include Homo sapiens, Bos (cattle), various amphibians, specifically Bombina bombina, and serpents. The bacterium is nonsporulating and has a singular replicon structure. In terms of health effects, P. rettgeri strain PR_162 16 is associated with multisystem infections and is implicated in ventilator-associated pneumonia (VAP) in humans. This pathogenicity highlights its relevance in clinical settings, particularly in patients with compromised health or those requiring mechanical ventilation. The diverse habitat of P. rettgeri strain PR_162 16, along with its ability to infect multiple hosts, suggests it has a versatile ecological niche. Its role as a pathogen in humans underscores the importance of monitoring environmental sources of this bacterium, especially in healthcare environments where vulnerable populations may be at risk for infections. Understanding its characteristics and behaviors can aid in developing strategies for infection control and treatment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusProvidencia
SpeciesProvidencia rettgeri
Strainstrain PR_162 16

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Providencia rettgeri strain PR_162 16
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens, Bos, Amphibia
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Providencia rettgeri strain PR_162 16, whole genome shotgun

Gene Summary

Adenine Count

1359876 bp

Thymine Count

1363270 bp

Guanine Count

945740 bp

Cytosine Count

941339 bp

Genome Length

4610225 bp

Protein-coding Genes

3775 genes

Non-Coding Genes

343 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna repair protein radcEGJ46_007035Not AvailablePositive1579308 - 157997325026.6
50s ribosomal protein l28EGJ46_007040Not AvailablePositive1580248 - 15804849025.06
50s ribosomal protein l33EGJ46_007045Not AvailablePositive1580496 - 15806636433.05
lipopolysaccharide core heptosyltransferase rfaqEGJ46_007050Not AvailablePositive1580862 - 158192640125.7
glycosyltransferase family 4 proteinEGJ46_007055Not AvailablePositive1581928 - 158304941815.5
lipopolysaccharide core heptose(i) kinase rfapEGJ46_007060Not AvailablePositive1583046 - 158384331044.9
lipopolysaccharide 3-alpha-galactosyltransferaseEGJ46_007065Not AvailablePositive1583867 - 158487738825.3
o-antigen ligase rfalEGJ46_007070Not AvailablePositive1584896 - 158613447095.8
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyaseEGJ46_007085Not AvailablePositive1588311 - 158912030432.8
pantetheine-phosphate adenylyltransferaseEGJ46_007090Not AvailableNegative1589131 - 158961617854.6

Displaying genes 1611 – 1620 of 4118 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Multisystem infectionsCausesPMC10546784
VapCausesPMC8258552
Ventilator-associated pneumoniaCausesPMC8258552

Displaying health effects 1 – 3 of 3 in total