Pseudomonas sp. p99-361 strain p99

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. strain p99-361 is characterized by having a single replicon, which indicates a simplified genomic structure compared to other strains with multiple replicons. This trait may influence its adaptability and metabolic capabilities, providing insights into its ecological role. The strain is cataloged under the accession number RHQS00000000.1, which serves as a reference for genetic and biological studies. The presence of one replicon suggests a streamlined genomic organization, potentially allowing for efficient replication and gene expression. In terms of its ecological role, Pseudomonas species are known for their versatility and ability to thrive in diverse environments. They are often associated with soil and water ecosystems where they can play crucial roles in nutrient cycling and biodegradation processes. The single-replicon structure of strain p99-361 may confer advantages in specific ecological niches, enabling it to respond effectively to environmental changes. Overall, the traits of Pseudomonas sp. strain p99-361 highlight its potential significance in microbial ecology, particularly in its ability to adapt and thrive in various habitats, which is essential for maintaining ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. p99-361
Strainstrain p99

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. p99-361 strain p99
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. p99-361 strain p99

Gene Summary

Adenine Count

1049612 bp

Thymine Count

1057144 bp

Guanine Count

1753528 bp

Cytosine Count

1737553 bp

Genome Length

5598483 bp

Protein-coding Genes

4983 genes

Non-Coding Genes

245 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hcp family type vi secretion system effectorEGJ15_15555Not AvailablePositive3245931 - 324641618102.4
duf4225 domain-containing proteinEGJ15_15560Not AvailablePositive3246473 - 324712923671.8
duf2937 family proteinEGJ15_15565Not AvailableNegative3247475 - 324799619769.8
class ii glutamine amidotransferaseEGJ15_15570Not AvailableNegative3248006 - 324877928557.1
mfs transporterEGJ15_15575Not AvailableNegative3248794 - 324929118468.5
s9 family peptidaseEGJ15_15580Not AvailablePositive3249414 - 325145675592.0
hypothetical proteinEGJ15_15585Not AvailableNegative3251553 - 32518319467.48
hnh nuclease family proteinEGJ15_15590Not AvailablePositive3251964 - 325233513836.1
trmh family rna methyltransferaseEGJ15_15595Not AvailablePositive3252407 - 325287717398.9
duf2892 domain-containing proteinEGJ15_15610Not AvailablePositive3253504 - 325384211691.9

Displaying genes 3101 – 3110 of 5228 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.