Pseudomonas sp. p106

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. p106 is characterized by having a single replicon, which may influence its genetic stability and replication dynamics. This bacterium is cataloged under the accession number RHQR00000000.1, indicating its genetic sequence has been documented in a public database, allowing for further study and comparison with other strains. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse environments, including soil, water, and as opportunistic pathogens in plants and animals. The single replicon structure of Pseudomonas sp. p106 could reflect adaptations to its ecological niche, potentially affecting its growth and survival strategies in various habitats. Understanding the genomic characteristics of Pseudomonas sp. p106, particularly its single-replicon feature, can provide insights into its ecological roles and potential applications in biotechnological contexts. For example, Pseudomonas species are often explored for their capabilities in bioremediation and biocontrol, which are crucial for environmental management and agriculture. The genetic information associated with accession RHQR00000000.1 may facilitate research into the specific traits of Pseudomonas sp. p106, ultimately contributing to a greater understanding of its ecological significance and potential utility in sustainable practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. p106
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. p106
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. p106 NODE_53_length_512_cov_19.0046, whole genome

Gene Summary

Adenine Count

1059575 bp

Thymine Count

1079814 bp

Guanine Count

1758154 bp

Cytosine Count

1719588 bp

Genome Length

5618726 bp

Protein-coding Genes

4979 genes

Non-Coding Genes

220 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
urea abc transporter atp-binding protein urtdEGJ09_19525Not AvailableNegative4097828 - 409868530936.4
urea abc transporter permease subunit urtcEGJ09_19530Not AvailableNegative4098682 - 409976138882.8
urea abc transporter permease subunit urtbEGJ09_19535Not AvailableNegative4099761 - 410124852634.5
urea abc transporter substrate-binding proteinEGJ09_19540Not AvailableNegative4101377 - 410264246137.0
d-serine/d-alanine/glycine transporterEGJ09_19545Not AvailableNegative4102829 - 410423551217.7
pepsy domain-containing proteinEGJ09_19550Not AvailableNegative4104434 - 410579850286.5
tonb-dependent copper receptorEGJ09_19555Not AvailableNegative4105858 - 410792474454.2
duf2946 domain-containing proteinEGJ09_19560Not AvailableNegative4107990 - 410842115518.9
copper chaperone pcu(a)cEGJ09_19565Not AvailableNegative4108448 - 410892717309.8
duf2946 domain-containing proteinEGJ09_19570Not AvailableNegative4108976 - 410936513878.0

Displaying genes 3911 – 3920 of 5199 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.