Pseudomonas sp. s199

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. S199 is characterized by having a single replicon, which is significant in understanding its genomic organization and replication mechanisms. The accession number for this strain is RHQQ00000000.1, serving as a unique identifier for researchers accessing its genetic information. The simplification of the genetic architecture, with only one replicon, may influence the organism's adaptability and metabolic capabilities. Pseudomonas species are known for their versatile metabolic pathways and ability to thrive in various environments, often linked to their genomic structure. Such a trait could enhance the ecological fitness of Pseudomonas sp. S199 in diverse habitats. The presence of a single replicon suggests that Pseudomonas sp. S199 might exhibit certain traits typical of other Pseudomonas species, such as resilience in harsh conditions and the capability to utilize a wide range of organic compounds. This versatility can be essential in ecological niches where resource availability fluctuates. In summary, the genomic feature of having one replicon provides insights into the potential adaptability and ecological roles of Pseudomonas sp. S199. This strain may play significant roles in biogeochemical cycles, particularly in the degradation of pollutants or organic materials, which is a hallmark of Pseudomonas species. Understanding the genomic characteristics of Pseudomonas sp. S199 may further illuminate its ecological contributions and applications in bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. s199
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. s199
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. s199 NODE_68_length_522_cov_53.8157, whole genome

Gene Summary

Adenine Count

784131 bp

Thymine Count

786607 bp

Guanine Count

1343771 bp

Cytosine Count

1342878 bp

Genome Length

4257585 bp

Protein-coding Genes

3890 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbonic anhydraseEGJ29_00195Not AvailablePositive51339 - 5204625935.2
asparaginaseEGJ29_00200Not AvailableNegative52057 - 5304934875.2
alanine:cation symporter family proteinEGJ29_00205Not AvailableNegative53180 - 5461951297.6
xre family transcriptional regulatorEGJ29_00210Not AvailablePositive54774 - 5559531141.2
gnat family n-acetyltransferaseEGJ29_00215Not AvailableNegative55600 - 5604316926.1
fmn-binding negative transcriptional regulatorEGJ29_00220Not AvailableNegative56049 - 5668123131.2
aspartate ammonia-lyaseEGJ29_00225Not AvailableNegative56852 - 5827651009.9
lysr family transcriptional regulatorEGJ29_00230Not AvailablePositive58439 - 5934133202.1
5-(carboxyamino)imidazole ribonucleotide mutaseEGJ29_00235Not AvailablePositive59675 - 6016617022.7
5-(carboxyamino)imidazole ribonucleotide synthaseEGJ29_00240Not AvailablePositive60167 - 6125238972.9

Displaying genes 41 – 50 of 3952 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.