Pseudomonas sp. s199

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. S199 is characterized by having a single replicon, which is significant in understanding its genomic organization and replication mechanisms. The accession number for this strain is RHQQ00000000.1, serving as a unique identifier for researchers accessing its genetic information. The simplification of the genetic architecture, with only one replicon, may influence the organism's adaptability and metabolic capabilities. Pseudomonas species are known for their versatile metabolic pathways and ability to thrive in various environments, often linked to their genomic structure. Such a trait could enhance the ecological fitness of Pseudomonas sp. S199 in diverse habitats. The presence of a single replicon suggests that Pseudomonas sp. S199 might exhibit certain traits typical of other Pseudomonas species, such as resilience in harsh conditions and the capability to utilize a wide range of organic compounds. This versatility can be essential in ecological niches where resource availability fluctuates. In summary, the genomic feature of having one replicon provides insights into the potential adaptability and ecological roles of Pseudomonas sp. S199. This strain may play significant roles in biogeochemical cycles, particularly in the degradation of pollutants or organic materials, which is a hallmark of Pseudomonas species. Understanding the genomic characteristics of Pseudomonas sp. S199 may further illuminate its ecological contributions and applications in bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. s199
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. s199
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. s199 NODE_68_length_522_cov_53.8157, whole genome

Gene Summary

Adenine Count

784131 bp

Thymine Count

786607 bp

Guanine Count

1343771 bp

Cytosine Count

1342878 bp

Genome Length

4257585 bp

Protein-coding Genes

3890 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenaseEGJ29_05925Not AvailablePositive1326694 - 132780939061.0
s-formylglutathione hydrolaseEGJ29_05930Not AvailablePositive1327903 - 132874831333.0
alkene reductaseEGJ29_05935Not AvailableNegative1328971 - 133002038230.4
transcriptional regulatorEGJ29_05940Not AvailableNegative1330054 - 133035611519.8
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseEGJ29_05945Not AvailablePositive1330573 - 133104616902.4
trna pseudouridine(13) synthase trudEGJ29_05950Not AvailablePositive1331043 - 133208338153.6
5'/3'-nucleotidase sureEGJ29_05955Not AvailablePositive1332083 - 133283226664.9
protein-l-isoaspartate(d-aspartate) o-methyltransferaseEGJ29_05960Not AvailablePositive1332874 - 133350923451.5
duf368 domain-containing proteinEGJ29_05965Not AvailablePositive1333529 - 133446433387.0
lysm peptidoglycan-binding domain-containing proteinEGJ29_05970Not AvailablePositive1334520 - 133532328600.3

Displaying genes 1181 – 1190 of 3952 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.