Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Empedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Empedobacter |
| Species | Empedobacter falsenii |
| Strain | strain WF_348 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1088596 bp
Thymine Count
1104292 bp
Guanine Count
507432 bp
Cytosine Count
501722 bp
Genome Length
3202065 bp
Protein-coding Genes
2973 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase 2 | EGI89_01045 | Not Available | Positive | 212100 - 212918 | 32219.8 |
| polyphosphate kinase 2 | EGI89_01050 | Not Available | Positive | 212936 - 213739 | 31582.9 |
| 50s ribosomal protein l19 | EGI89_01055 | Not Available | Positive | 213855 - 214205 | 13310.4 |
| susc/raga family tonb-linked outer membrane protein | EGI89_01060 | Not Available | Positive | 214496 - 217417 | 108998.0 |
| ragb/susd family nutrient uptake outer membrane protein | EGI89_01065 | Not Available | Positive | 217428 - 219074 | 62289.6 |
| ribonuclease z | EGI89_01070 | Not Available | Negative | 219142 - 220065 | 35184.4 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | EGI89_01075 | Not Available | Negative | 220062 - 220643 | 21455.4 |
| cpbp family intramembrane metalloprotease | EGI89_01080 | Not Available | Negative | 220644 - 221477 | 30884.2 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | EGI89_01085 | Not Available | Negative | 221470 - 221943 | 18361.2 |
| yihy/virulence factor brkb family protein | EGI89_01090 | Not Available | Positive | 221970 - 222941 | 37974.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
