Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Empedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Empedobacter |
| Species | Empedobacter falsenii |
| Strain | strain WF_348 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1088596 bp
Thymine Count
1104292 bp
Guanine Count
507432 bp
Cytosine Count
501722 bp
Genome Length
3202065 bp
Protein-coding Genes
2973 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EGI89_11705 | Not Available | Positive | 2416659 - 2418713 | 77943.0 |
| thioredoxin family protein | EGI89_11710 | Not Available | Positive | 2418713 - 2419159 | 17898.9 |
| homoserine dehydrogenase | EGI89_11715 | Not Available | Negative | 2419216 - 2420397 | 43857.0 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | EGI89_11720 | Not Available | Positive | 2421211 - 2422209 | 36793.1 |
| methionine synthase | EGI89_11725 | Not Available | Positive | 2422197 - 2424860 | 99701.5 |
| methylenetetrahydrofolate reductase | EGI89_11730 | Not Available | Positive | 2425135 - 2426091 | 36243.8 |
| alpha-ketoglutarate-dependent dioxygenase alkb | EGI89_11735 | Not Available | Positive | 2426547 - 2427161 | 23599.1 |
| hypothetical protein | EGI89_11740 | Not Available | Negative | 2427162 - 2427698 | 20481.4 |
| d-alanyl-d-alanine carboxypeptidase family protein | EGI89_11745 | Not Available | Negative | 2427802 - 2428566 | 29241.0 |
| hlyc/corc family transporter | EGI89_11750 | Not Available | Positive | 2428618 - 2429892 | 48116.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
