Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Empedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Empedobacter |
| Species | Empedobacter falsenii |
| Strain | strain WF_348 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1088596 bp
Thymine Count
1104292 bp
Guanine Count
507432 bp
Cytosine Count
501722 bp
Genome Length
3202065 bp
Protein-coding Genes
2973 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxybutyryl-coa dehydrogenase | EGI89_11405 | Not Available | Positive | 2358659 - 2359816 | 43274.9 |
| hydroxyphenylacetyl-coa thioesterase paai | EGI89_11410 | Not Available | Positive | 2359831 - 2360244 | 15254.3 |
| 3-oxoadipyl-coa thiolase | EGI89_11415 | Not Available | Positive | 2360296 - 2361501 | 42098.6 |
| transferase hexapeptide repeat family protein | EGI89_11420 | Not Available | Positive | 2361583 - 2362176 | 21818.3 |
| phenylacetic acid degradation bifunctional protein paaz | EGI89_11425 | Not Available | Positive | 2362328 - 2364379 | 74015.6 |
| enoyl-coa hydratase/isomerase family protein | EGI89_11430 | Not Available | Positive | 2364588 - 2365343 | 27187.4 |
| hypothetical protein | EGI89_11435 | Not Available | Negative | 2365399 - 2365776 | 14709.5 |
| luxr family transcriptional regulator | EGI89_11440 | Not Available | Positive | 2365977 - 2366735 | 30602.0 |
| hypothetical protein | EGI89_11445 | Not Available | Negative | 2366770 - 2367666 | 34476.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | EGI89_11450 | Not Available | Positive | 2367754 - 2368188 | 16208.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
