Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Empedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Empedobacter |
| Species | Empedobacter falsenii |
| Strain | strain WF_348 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1088596 bp
Thymine Count
1104292 bp
Guanine Count
507432 bp
Cytosine Count
501722 bp
Genome Length
3202065 bp
Protein-coding Genes
2973 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | EGI89_10180 | Not Available | Negative | 2097989 - 2098414 | 16134.3 |
| hypothetical protein | EGI89_10185 | Not Available | Positive | 2098516 - 2099766 | 48009.9 |
| tonb-dependent receptor | EGI89_10190 | Not Available | Positive | 2099864 - 2102272 | 91496.0 |
| rida family protein | EGI89_10195 | Not Available | Positive | 2102494 - 2102646 | 5713.02 |
| yggs family pyridoxal phosphate-dependent enzyme | EGI89_10200 | Not Available | Negative | 2102733 - 2103392 | 25227.8 |
| duf1015 domain-containing protein | EGI89_10205 | Not Available | Negative | 2103396 - 2104643 | 48732.0 |
| 3-phosphoglycerate dehydrogenase | EGI89_10210 | Not Available | Negative | 2104677 - 2105627 | 34191.1 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | EGI89_10215 | Not Available | Negative | 2105715 - 2106785 | 39180.8 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EGI89_10220 | Not Available | Negative | 2106948 - 2108207 | 46748.4 |
| pyridoxal-phosphate dependent enzyme | EGI89_10225 | Not Available | Negative | 2108301 - 2109338 | 37923.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
